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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8283108_8283594_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8283108 - 8283594

Intron Length:

487

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGCTGT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTCATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTCAT

U12 Branch Point Sequence:

TTCCCCTTCATT

Flanking Amino Acid:

ILTLLNSTNKDWWKVEVNDR

Intron Amino Acid Position:

1003

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.6

0.75

71.4

41.2

Major BPS

0.62

1.1

77.2

Major PPT

78.1

0.63

0.8

69.2

35.6

Minor 5ss

55.9

0.2

2.5

73.6

Minor BPS

65.1

0.56

1.8

81.08

41.1

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568