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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8288344_8288505_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8288344 - 8288505

Intron Length:

162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TTTTTACTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

TTTTTTTTACTT

Flanking Amino Acid:

MDDVATRRDALLNRRNALHE

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.1

71.3

40.3

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

91.7

0.94

0.7

89.8

25.4

Minor 5ss

-1.4

2.8

52.3

44.3

Minor BPS

70.1

0.71

1.5

86.64

33.8

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568