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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8290643_8291377_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8290643 - 8291377

Intron Length:

735

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAATA

5'SS Class:

strong_major

3'SS Sequence:

TTGTTTTTATAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACGAAT

U12 Branch Point Sequence:

TTGTTTTTATAA

Flanking Amino Acid:

ERHARLNDSYRLQRFLADFR

Intron Amino Acid Position:

362

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

80.8

33.7

Major BPS

61.8

0.29

1.3

69.9

35.3

Major PPT

73.3

0.52

1.1

80.4

36.2

Minor 5ss

35.7

-1.6

3.3

48.3

47.4

Minor BPS

55.8

0.18

1.7

67.59

39.3

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568