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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8291772_8292422_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8291772 - 8292422

Intron Length:

651

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATCC

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTTTGAAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATAAAA

U12 Branch Point Sequence:

TTTCTTTTGAAG

Flanking Amino Acid:

FGAAEVQRFNRDVDETISWI

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

71.3

33.2

Major BPS

0.08

60.9

31.3

Major PPT

80.6

0.69

82.5

26.5

Minor 5ss

45.3

-0.5

2.7

60.2

44.5

Minor BPS

56.6

0.06

1.5

64.42

37.4

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568