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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8296970_8297592_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8296970 - 8297592

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCAAGTCCA

5'SS Class:

strong_major

3'SS Sequence:

GTTCTGTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAT

U12 Branch Point Sequence:

TGTTCTTTGATG

Flanking Amino Acid:

ENYKDPSNLQGKLQKHQAFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

97.8

1.13

0.7

81.1

32.3

Major BPS

0.85

0.9

39.9

Major PPT

82.6

0.73

0.9

76.5

37.5

Minor 5ss

24.2

-3

3.6

33.3

41.7

Minor BPS

70.6

0.5

1.3

70.84

36.6

Associated Gene:

Gene:

SPTAN1

Ensembl Gene ID:

ENSAPLG00000014718

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015697

8258262 - 8297829

39568