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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8310721_8311805_R


Intron Information:

Intron Rank:
11

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8310721 - 8311805

Intron Length:
1085

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTCAGTGAT

5'SS Class:
strong_major

3'SS Sequence:
TTCTATACCGTAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATTCTAT

U12 Branch Point Sequence:
TATTCTGAGACC

Flanking Amino Acid:
TATLLFGFLEVCGNALMKQY

Intron Amino Acid Position:
629

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
82.3
0.76
1.2
81.4
32.7

Major BPS
65
0.37
1.3
64.5
42.5

Major PPT
71.5
0.48
0.8
66.9
33.7

Minor 5ss
29.8
-2.3
3.1
40.6
45.6

Minor BPS
47.5
-0.2
2.3
65.93
40.4

Associated Gene:

Gene:
GLE1

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8309635 - 8319477
9843