Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8312373_8312636_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8312373 - 8312636

Intron Length:

264

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATTTA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCATACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CTTCTCATACTT

Flanking Amino Acid:

KEGTSMEEYQRMLGYQFKDS

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.8

86.5

23.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

71.3

0.48

0.9

70.6

34.1

Minor 5ss

43.1

-0.8

2.9

58.1

46.5

Minor BPS

48.4

-0

1.9

69.5

41.9

Associated Gene:

Gene:

GLE1

Ensembl Gene ID:

ENSAPLG00000016355

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017074

8309635 - 8319477

9843