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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8314275_8315250_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8314275 - 8315250

Intron Length:
976

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTACAAACA

5'SS Class:
major

3'SS Sequence:
TGTTGTTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTAAA

U12 Branch Point Sequence:
TTTTTTTAAAAT

Flanking Amino Acid:
SEISNCKDNEVKKIKTDLQK

Intron Amino Acid Position:
416

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73
0.54
1
67.9
37.1

Major BPS
90.4
1
0.7
90.2
19.3

Major PPT
86.1
0.81
0.8
80.6
37

Minor 5ss
32
-2.1
3.1
41.5
44.6

Minor BPS
64.2
0.52
1.7
84.29
36.6

Associated Gene:

Gene:
GLE1

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8309635 - 8319477
9843