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Intron Name: Anas_platyrhynchos_platyrhynchos_18_834441_835822_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

834441 - 835822

Intron Length:

1382

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTGAGCTGT

5'SS Class:

major

3'SS Sequence:

TTCTTCCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAG

U12 Branch Point Sequence:

CTATGTTTAGCT

Flanking Amino Acid:

DPIFQCWAYRSIHLSFLRTV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

65.8

42.7

Major BPS

57.4

0.18

1.6

57.4

49.1

Major PPT

89.5

0.89

0.6

84.7

Minor 5ss

39.7

-1.2

3.1

47.2

48.2

Minor BPS

52.1

0.14

72.24

44.9

Associated Gene:

Gene:

GRIN1

Ensembl Gene ID:

ENSAPLG00000012612

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027978

813159 - 836204

23046

ENSAPLT00000013240

817441 - 836204

18764