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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8432012_8433497_F


Intron Information:

Intron Rank:
16

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8432012 - 8433497

Intron Length:
1486

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GGG|GTAAGTTAA

5'SS Class:
strong_major

3'SS Sequence:
TTCATTATGTAAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TATTCAT

U12 Branch Point Sequence:
TGTTTCTTACTA

Flanking Amino Acid:
RAGVYPERVGIFLRKA*

Intron Amino Acid Position:
612

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.4
0.88
0.9
80.2
30.6

Major BPS
92.2
1.05
0.7
91.9
19.6

Major PPT
62.4
0.28
1.2
68.4
41.2

Minor 5ss
39.1
-1.2
2.8
40.8
45.4

Minor BPS
66.9
0.53
1.6
75.34
36.5

Associated Gene:

Gene:
DNM1

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8398207 - 8433518
35312