Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8432012_8434403_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8432012 - 8434403

Intron Length:

2392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

ATTTGAAGAACT

Flanking Amino Acid:

RAGVYPERVGASEAEENGSD

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.2

30.6

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

82.1

0.72

0.7

76.4

25.6

Minor 5ss

39.1

-1.2

2.8

40.8

45.4

Minor BPS

45.8

-0.2

2.3

74.01

Associated Gene:

Gene:

DNM1

Ensembl Gene ID:

ENSAPLG00000001168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001454

8397945 - 8435594

37650

ENSAPLT00000034023

8397945 - 8435594

37650