About Basic Search Advanced Search Downloads
Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8434575_8434739_F


Intron Information:

Intron Rank:
17

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8434575 - 8434739

Intron Length:
165

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAT|GTACTTATC

5'SS Class:
major

3'SS Sequence:
TGTTCCTCTGCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AACTGAT

U12 Branch Point Sequence:
GGCAACTGATTT

Flanking Amino Acid:
KTIMHLMINNTKDFIHSELL

Intron Amino Acid Position:
651

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.6
0.39
1.2
71.2
38.7

Major BPS
74.7
0.61
0.9
63.4
35.6

Major PPT
83.5
0.75
0.8
77.6
31.1

Minor 5ss
41.7
-0.9
3.1
58.7
39.1

Minor BPS
41.9
-0.5
1.8
52.45
41.9

Associated Gene:

Gene:
DNM1

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8397945 - 8435594
37650

8397945 - 8435594
37650