Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8434982_8435371_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8434982 - 8435371

Intron Length:

390

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCAGAG

5'SS Class:

major

3'SS Sequence:

CTCTGTTTGTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTGAA

U12 Branch Point Sequence:

TGCAGTTGAATT

Flanking Amino Acid:

LQVQSVPSGRRSPTSSPTPQ

Intron Amino Acid Position:

731

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.6

0.39

1.2

57.1

42.4

Major BPS

63.2

0.33

1.1

55.1

42.1

Major PPT

0.59

75.9

Minor 5ss

34.2

-1.8

3.6

46.7

48.6

Minor BPS

46.5

-0.1

1.9

61.86

42.5

Associated Gene:

Gene:

DNM1

Ensembl Gene ID:

ENSAPLG00000001168

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034023

8397945 - 8435594

37650

ENSAPLT00000001454

8397945 - 8435594

37650