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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8453577_8453942_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8453577 - 8453942

Intron Length:

366

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTCAGAGAG

5'SS Class:

weak_major

3'SS Sequence:

CATGGATATTGAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACTTCCTTAGCA

Flanking Amino Acid:

VTELGNREKPPSSPAGPTEA

Intron Amino Acid Position:

471

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.7

0.09

1.4

50.3

40.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

46.9

-0.1

1.7

51.4

46.2

Minor 5ss

28.1

-2.5

3.3

40.1

45.4

Minor BPS

72.6

0.71

1.5

77.87

38.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023926

8448559 - 8467338

18780