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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8454380_8454557_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8454380 - 8454557

Intron Length:

178

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGTGT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTTGCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAG

U12 Branch Point Sequence:

CAGCTGATAACA

Flanking Amino Acid:

RASLETQIAQLSESLHQLQT

Intron Amino Acid Position:

294

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

79.5

36.8

Major BPS

68.2

0.45

1.5

77.7

37.1

Major PPT

0.49

67.4

37.9

Minor 5ss

38.5

-1.3

3.4

55.9

48.3

Minor BPS

42.2

-0.5

2.2

50.26

40.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023926

8448559 - 8467338

18780

ENSAPLT00000003514

8448559 - 8467338

18780