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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8455871_8456287_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8455871 - 8456287

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCCG

5'SS Class:

strong_major

3'SS Sequence:

GTGTTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

GCCACTTTATTT

Flanking Amino Acid:

DNLKLELYKHSKGNEEVKQQ

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

66.3

45.2

Major BPS

75.1

0.62

65.6

Major PPT

83.8

0.76

0.8

81.2

36.5

Minor 5ss

38.2

-1.3

48.4

47.3

Minor BPS

49.4

0.03

1.6

60.6

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023926

8448559 - 8467338

18780

ENSAPLT00000003514

8448559 - 8467338

18780