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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8456347_8456973_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8456347 - 8456973

Intron Length:

627

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAGTC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTTCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

TTTAGATAAATT

Flanking Amino Acid:

ISMQQKQAEKHNKELVKERD

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.99

0.8

82.4

28.6

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

87.7

0.85

0.7

80.3

31.7

Minor 5ss

-1.7

3.5

49.9

46.6

Minor BPS

-0.1

2.3

73.63

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023926

8448559 - 8467338

18780

ENSAPLT00000003514

8448559 - 8467338

18780