Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8457847_8458032_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8457847 - 8458032

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAG

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

ATTTTTTGCACT

Flanking Amino Acid:

EQAALREQLQVHIQTIGILV

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.7

0.91

0.9

71.6

40.1

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

71.2

0.48

71.9

26.8

Minor 5ss

31.3

-2.1

3.1

38.3

46.6

Minor BPS

54.6

0.23

1.9

78.48

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023926

8448559 - 8467338

18780