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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8461352_8465420_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8461352 - 8465420

Intron Length:

4069

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGACTTGC

5'SS Class:

weak_major

3'SS Sequence:

TGCTTTGGATGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TAAAAAT

U12 Branch Point Sequence:

GATTCATGAAGC

Flanking Amino Acid:

RKVRQCSCPSQTGERTFIKE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.2

54.2

40.1

Major BPS

62.8

0.32

1.1

67.9

34.4

Major PPT

47.7

-0.1

1.8

58.3

46.3

Minor 5ss

42.8

-0.8

2.8

57.6

41.2

Minor BPS

48.9

-0.1

63.04

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003401

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023926

8448559 - 8467338

18780