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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8472150_8472729_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8472150 - 8472729

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGCCGGTA

5'SS Class:

major

3'SS Sequence:

CTCCTTCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TTTCTCCCATTT

Flanking Amino Acid:

YGSRAPTVHETTLHVTSHAF

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

63.6

0.32

1.2

60.3

40.6

Major BPS

71.6

0.54

33.1

Major PPT

77.4

0.62

0.7

71.8

26.5

Minor 5ss

31.8

-2.1

3.8

46.3

Minor BPS

45.5

-0.2

70.16

40.9

Associated Gene:

Gene:

C9orf116

Ensembl Gene ID:

ENSAPLG00000017643

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043766

8471964 - 8475843

3880

ENSAPLT00000035780

8471964 - 8474858

2895