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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8484789_8484979_R


Intron Information:

Intron Rank:
2

Intron Class:
major-like

Intron Phase:
0

Intron Coordinates:
8484789 - 8484979

Intron Length:
191

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
GGG|GCCACTGAG

5'SS Class:
major

3'SS Sequence:
GAAGGAGAAGGAG|G

3'SS Class:
degenerate_major

U2 Branch Point Sequence:
TTTACAG

U12 Branch Point Sequence:
TGCAGGTTTACA

Flanking Amino Acid:
QQVGLCPAPGVIIKCGIEEA

Intron Amino Acid Position:
59

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
60.6
0.25
1.4
55.7
46.1

Major BPS
58.8
0.22
1.6
75
40

Major PPT
37
-0.7
1.6
22.3
35.4

Minor 5ss
22.2
-3.2
3.7
23.1
37.3

Minor BPS
40.1
-0.7
2.5
52.56
45.1

Associated Gene:

Gene:
DIPK1B

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8483554 - 8488333
4780

8483554 - 8487454
3901