Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_18_8487167_8488325_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8487167 - 8488325

Intron Length:

1159

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCCTTTG

5'SS Class:

weak_major

3'SS Sequence:

TTCCCTTCCAGAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCGTGAT

U12 Branch Point Sequence:

TCCCCCGTGATT

Flanking Amino Acid:

INSRLPGIKVKY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.5

0.2

1.5

60.8

46.5

Major BPS

56.3

0.16

1.3

48.7

45.1

Major PPT

58.4

0.19

1.6

67.9

32.2

Minor 5ss

43.7

-0.7

2.9

58.9

45.6

Minor BPS

49.4

0.03

2.1

67.95

43.6

Associated Gene:

Gene:

DIPK1B

Ensembl Gene ID:

ENSAPLG00000004075

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035370

8483554 - 8488333

4780