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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8512549_8514811_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
8512549 - 8514811

Intron Length:
2263

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGT|GTAAGTGCC

5'SS Class:
major

3'SS Sequence:
TTCGTCTTCCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TATTGAT

U12 Branch Point Sequence:
GGTTTATTGATT

Flanking Amino Acid:
ISFLEERLETCSCKNEL*

Intron Amino Acid Position:
269

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
73.5
0.55
1.1
68.5
37.9

Major BPS
88.6
0.96
0.8
77.7
37.1

Major PPT
80.3
0.68
0.8
72.6
37.6

Minor 5ss
35.9
-1.6
3.2
45.9
42.3

Minor BPS
57.5
0.32
1.6
73.31
37.4

Associated Gene:

Gene:
EGFL7

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8512253 - 8526847
14595