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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8515345_8516152_R


Intron Information:

Intron Rank:
7

Intron Class:
major-like

Intron Phase:
1

Intron Coordinates:
8515345 - 8516152

Intron Length:
808

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAACCTTC

5'SS Class:
weak_major

3'SS Sequence:
CATATTTTTTCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTTAC

U12 Branch Point Sequence:
TTTTTACTAACC

Flanking Amino Acid:
GPGPGTFSQAGPSNEMKEEM

Intron Amino Acid Position:
193

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.4
0.65
1.2
73.2
39.3

Major BPS
86.6
0.91
0.8
77.7
36.7

Major PPT
83.4
0.75
0.8
80.7
36.4

Minor 5ss
63.9
0.47
2.4
76.5
39.2

Minor BPS
62.1
0.36
1.9
80.2
34

Associated Gene:

Gene:
EGFL7

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8513454 - 8524948
11495

8512253 - 8526847
14595