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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8518302_8518450_R


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
8518302 - 8518450

Intron Length:
149

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGCAG

5'SS Class:
strong_major

3'SS Sequence:
TTCTGTGTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
AGCTCAG

U12 Branch Point Sequence:
AGTCCCACAGCT

Flanking Amino Acid:
CQGHRLCSTYRTIYKVAYRQ

Intron Amino Acid Position:
68

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
83
0.78
0.9
65.6
41.7

Major BPS
48.8
-0
1.5
57.1
41.8

Major PPT
81.7
0.71
0.9
76.2
37.8

Minor 5ss
24.7
-2.9
3
28.6
43.8

Minor BPS
45.8
-0.2
2
66.92
42.8

Associated Gene:

Gene:
EGFL7

Ensembl Gene ID:

Chromosome:
18

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8513454 - 8524948
11495

8512253 - 8526847
14595