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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8617757_8618096_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8617757 - 8618096

Intron Length:

340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

AGCTCCTCACGC

Flanking Amino Acid:

YNCLCLKGTTGPNCEINLDD

Intron Amino Acid Position:

334

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

38.4

Major BPS

72.4

0.56

73.5

32.5

Major PPT

81.6

0.71

0.7

74.4

30.8

Minor 5ss

33.3

-1.9

2.8

38.7

46.6

Minor BPS

-0.3

2.1

53.52

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004882

8614497 - 8631877

17381