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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8619377_8619525_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8619377 - 8619525

Intron Length:

149

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTAAGGACG

5'SS Class:

strong_major

3'SS Sequence:

TTTTGCTCCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

AGTTTTGCACCT

Flanking Amino Acid:

YICTCREGFSGPNCQTNINE

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

67.4

43.6

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

77.4

0.62

0.8

70.3

36.4

Minor 5ss

33.1

-1.9

3.1

44.3

Minor BPS

41.9

-0.5

2.2

62.38

42.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004882

8614497 - 8631877

17381