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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8619640_8620467_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8619640 - 8620467

Intron Length:

828

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTGCCTGCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATCAG

U12 Branch Point Sequence:

TGTGCCTGCACA

Flanking Amino Acid:

YTCNCLLPYTGATCEDVLAP

Intron Amino Acid Position:

522

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

47.7

-0.1

1.5

55.4

40.3

Major PPT

67.1

0.39

60.7

40.3

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

52.1

0.06

2.1

69.02

43.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004882

8614497 - 8631877

17381