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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8622496_8622667_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8622496 - 8622667

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TCCCTCCTCGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGAACAT

U12 Branch Point Sequence:

ACATCTCTGACA

Flanking Amino Acid:

TDYLGGYSCECVAGYHGVNC

Intron Amino Acid Position:

870

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

55.8

0.15

1.3

63.4

42.8

Major PPT

73.5

0.53

0.7

68.9

24.9

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

0.09

1.6

61.88

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004882

8614497 - 8631877

17381