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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8623373_8623473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8623373 - 8623473

Intron Length:

101

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAC

U12 Branch Point Sequence:

GCCCCCTTTACA

Flanking Amino Acid:

YKCECRPGYAGRRCDTVVDG

Intron Amino Acid Position:

1000

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.84

0.9

74.9

35.3

Major BPS

72.8

0.57

30.3

Major PPT

82.7

0.73

0.7

76.9

Minor 5ss

33.5

-1.9

3.4

47.6

Minor BPS

56.9

0.21

1.7

61.73

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004882

8614497 - 8631877

17381