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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8629862_8629963_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8629862 - 8629963

Intron Length:

102

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTACTGCAG

5'SS Class:

major

3'SS Sequence:

CCTTCCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTAAC

U12 Branch Point Sequence:

GTTTCCTGGCCT

Flanking Amino Acid:

HADVNAVDDLGKSALHWAAA

Intron Amino Acid Position:

1727

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.3

0.41

1.1

53.5

Major BPS

57.1

0.18

1.1

Major PPT

82.5

0.73

0.7

76.7

25.3

Minor 5ss

29.1

-2.4

3.4

38.3

46.7

Minor BPS

46.2

-0.2

3.6

81.01

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000004580

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004882

8614497 - 8631877

17381