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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8645923_8648089_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8645923 - 8648089

Intron Length:

2167

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTATGAAGT

5'SS Class:

strong_major

3'SS Sequence:

TGTGTACTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTGAA

U12 Branch Point Sequence:

GGGACAATAACT

Flanking Amino Acid:

ASHCSDRPSSRQGYPEDYYA

Intron Amino Acid Position:

1300

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

77.2

37.7

Major BPS

61.6

0.29

1.2

55.4

Major PPT

76.8

0.6

66.7

44.1

Minor 5ss

41.3

-1

2.9

58.1

46.1

Minor BPS

47.8

-0

1.9

65.24

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006657

8641417 - 8665950

24534

ENSAPLT00000047872

8641417 - 8665950

24534

ENSAPLT00000034392

8641417 - 8665950

24534