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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8654799_8654983_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8654799 - 8654983

Intron Length:

185

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTAATTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATTCTTCTAATT

Flanking Amino Acid:

MSGRMPAASTCCGDEKWGDW

Intron Amino Acid Position:

1756

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

72.8

39.3

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.2

0.61

0.8

74.8

33.6

Minor 5ss

-0.9

3.1

57.3

46.8

Minor BPS

57.2

0.3

1.6

75.99

34.5

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047872

8641417 - 8665950

24534

ENSAPLT00000034392

8641417 - 8665950

24534

ENSAPLT00000006657

8641417 - 8665950

24534