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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8656466_8657045_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8656466 - 8657045

Intron Length:

580

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTGTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAT

U12 Branch Point Sequence:

GTTAGTATATTT

Flanking Amino Acid:

RLRHVDGQIKGGAIAYNTDR

Intron Amino Acid Position:

1953

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

0.52

1.1

77.7

35.3

Major PPT

90.9

0.92

0.8

88.3

28.9

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

42.1

-0.5

2.1

62.04

42.3

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047872

8641417 - 8665950

24534

ENSAPLT00000034392

8641417 - 8665950

24534

ENSAPLT00000006657

8641417 - 8665950

24534