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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8658422_8658980_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

8658422 - 8658980

Intron Length:

559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATCTTTT

5'SS Class:

weak_minor

3'SS Sequence:

TATATCTAACCAG|G

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TTATATCTAACC

Flanking Amino Acid:

EDFYNRMASMAPGRRSRSAS

Intron Amino Acid Position:

2134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

73.2

38.4

Major BPS

79.2

0.73

75.3

39.4

Major PPT

67.3

0.39

1.1

60.3

44.6

Minor 5ss

77.6

0.93

1.6

81.3

33.3

Minor BPS

58.2

0.24

1.8

73.22

37.1

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034392

8641417 - 8665950

24534

ENSAPLT00000047872

8641417 - 8665950

24534