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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8658422_8659215_F

Intron Information:

Intron Rank:

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

8658422 - 8659215

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATCTTTT

5'SS Class:

weak_minor

3'SS Sequence:

ATTTGTGATACAG|G

3'SS Class:

minor_hybrid

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TTCCCATGTATT

Flanking Amino Acid:

EDFYNRMASMGYGRRSRTTS

Intron Amino Acid Position:

2134

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.6

0.46

1.2

73.2

38.4

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

72.4

0.5

1.1

65.8

44.1

Minor 5ss

77.6

0.93

1.6

81.3

33.3

Minor BPS

-0.2

67.64

42.8

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006657

8641417 - 8665950

24534