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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8661461_8662003_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8661461 - 8662003

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATTTCCTTTGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTAAAT

U12 Branch Point Sequence:

TCTGACTAAATC

Flanking Amino Acid:

VPANVFVPNSVPGEPQPMEG

Intron Amino Acid Position:

2315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

76.6

Major BPS

0.27

1.1

67.3

35.2

Major PPT

82.8

0.74

0.7

78.1

29.9

Minor 5ss

42.6

-0.8

2.8

58.3

46.4

Minor BPS

49.5

-0

1.9

62.54

43.6

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047872

8641417 - 8665950

24534

ENSAPLT00000034392

8641417 - 8665950

24534

ENSAPLT00000006657

8641417 - 8665950

24534