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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8662105_8662524_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8662105 - 8662524

Intron Length:

420

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGTTAA

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTTCTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAA

U12 Branch Point Sequence:

TAAGATTTAAAA

Flanking Amino Acid:

TEPAAAADPEYLNPPILPPG

Intron Amino Acid Position:

2349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.9

80.4

30.1

Major BPS

81.6

0.78

0.8

24.9

Major PPT

86.2

0.81

0.7

85.6

29.2

Minor 5ss

38.4

-1.3

49.1

47.1

Minor BPS

49.7

-0

1.7

59.79

39.5

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000006657

8641417 - 8665950

24534

ENSAPLT00000047872

8641417 - 8665950

24534

ENSAPLT00000034392

8641417 - 8665950

24534