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Intron Name: Anas_platyrhynchos_platyrhynchos_18_866307_882190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

866307 - 882190

Intron Length:

15884

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTCCT

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

TCTCCCCTGAGG

Flanking Amino Acid:

LLDLSVSARQVGPGLVFLIF

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

77.1

37.8

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

83.1

0.74

0.8

77.1

31.6

Minor 5ss

42.9

-0.8

2.8

59.8

44.7

Minor BPS

47.5

-0.3

56.96

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012596

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030411

858981 - 885138

26158