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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8664396_8665265_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8664396 - 8665265

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TACTCTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTTTGTTTATTC

Flanking Amino Acid:

QFYNPSQFAQSPAVTGSSRP

Intron Amino Acid Position:

2419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.4

0.79

0.9

82.1

24.6

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

86.3

0.82

0.7

84.3

30.1

Minor 5ss

31.3

-2.1

2.7

33.5

35.5

Minor BPS

57.3

0.21

73.5

38.4

Associated Gene:

Gene:

SEC16A

Ensembl Gene ID:

ENSAPLG00000006353

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047872

8641417 - 8665950

24534

ENSAPLT00000034392

8641417 - 8665950

24534

ENSAPLT00000006657

8641417 - 8665950

24534