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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8679396_8679837_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8679396 - 8679837

Intron Length:

442

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTCAGCGGC

5'SS Class:

major

3'SS Sequence:

TATTTGCTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

TCTTCTTTGAAC

Flanking Amino Acid:

FILMAGAVGEVELERAKTQL

Intron Amino Acid Position:

412

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.3

63.6

42.3

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

0.65

0.9

72.7

37.3

Minor 5ss

32.1

-2

3.2

44.8

Minor BPS

68.7

0.57

1.4

74.45

36.6

Associated Gene:

Gene:

PMPCA

Ensembl Gene ID:

ENSAPLG00000007036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007331

8677560 - 8683775

6216

ENSAPLT00000046966

8677560 - 8683686

6127