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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8681148_8681393_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8681148 - 8681393

Intron Length:

246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACGGAA

5'SS Class:

major

3'SS Sequence:

CTTTTTCACACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAC

U12 Branch Point Sequence:

TTCTTTTTCACA

Flanking Amino Acid:

VAQYTGGIVKVEKDMSDVSL

Intron Amino Acid Position:

290

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.4

0.62

1.2

69.3

37.4

Major BPS

90.1

0.99

0.7

91.6

20.3

Major PPT

80.8

0.69

0.8

76.6

Minor 5ss

34.1

-1.8

3.6

46.2

49.1

Minor BPS

62.5

0.39

1.7

73.92

38.7

Associated Gene:

Gene:

PMPCA

Ensembl Gene ID:

ENSAPLG00000007036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046966

8677560 - 8683686

6127

ENSAPLT00000007331

8677560 - 8683775

6216