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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8682140_8682303_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8682140 - 8682303

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGAGAA

5'SS Class:

major

3'SS Sequence:

TCTCTTATTATAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

CCTCTCTTATTA

Flanking Amino Acid:

ADVALQPRLSDEEIEMTRMA

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

0.9

69.1

30.3

Major BPS

79.1

0.72

69.3

38.4

Major PPT

81.6

0.71

0.8

76.9

30.3

Minor 5ss

30.4

-2.2

3.2

37.3

47.4

Minor BPS

52.4

0.07

1.6

59.59

41.1

Associated Gene:

Gene:

PMPCA

Ensembl Gene ID:

ENSAPLG00000007036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046966

8677560 - 8683686

6127

ENSAPLT00000007331

8677560 - 8683775

6216