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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8682399_8682706_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8682399 - 8682706

Intron Length:

308

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTATGAGGC

5'SS Class:

strong_major

3'SS Sequence:

TCTTGCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTGAC

U12 Branch Point Sequence:

TGGTGCAGAACC

Flanking Amino Acid:

HGGICDCQASRDTIMYAVSA

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

38.4

Major BPS

62.5

0.31

1.2

54.8

42.1

Major PPT

83.4

0.75

0.8

77.1

31.6

Minor 5ss

36.9

-1.5

3.3

50.4

46.2

Minor BPS

46.6

-0.2

2.1

61.23

43.5

Associated Gene:

Gene:

PMPCA

Ensembl Gene ID:

ENSAPLG00000007036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046966

8677560 - 8683686

6127

ENSAPLT00000007331

8677560 - 8683775

6216