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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8686408_8686824_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8686408 - 8686824

Intron Length:

417

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCTC

5'SS Class:

strong_major

3'SS Sequence:

TCTCGCGCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCCCAT

U12 Branch Point Sequence:

GGTGCCTTACCC

Flanking Amino Acid:

TVIANSRSAVRQLVSGAESL

Intron Amino Acid Position:

136

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

38.2

Major BPS

59.9

0.25

1.3

70.1

Major PPT

72.6

0.51

0.9

65.4

36.2

Minor 5ss

29.9

-2.3

3.4

45.6

Minor BPS

59.7

0.28

1.8

67.83

43.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017117

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021043

8685376 - 8686918

1543