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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8694787_8695239_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8694787 - 8695239

Intron Length:

453

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTACAAAAT

5'SS Class:

weak_major

3'SS Sequence:

AGAAAAGATCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CTCTTTTTGACT

Flanking Amino Acid:

KWKLMIGSKVLPAKRRHVEE

Intron Amino Acid Position:

502

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.5

0.08

1.1

58.5

40.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

44.1

-0.3

1.2

28.1

40.1

Minor 5ss

36.3

-1.5

3.5

46.3

Minor BPS

68.3

0.66

1.2

77.67

39.7

Associated Gene:

Gene:

SNAPC4

Ensembl Gene ID:

ENSAPLG00000007557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007857

8687247 - 8701565

14319