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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8698961_8699041_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8698961 - 8699041

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CAG|GCTCAACTT

5'SS Class:

major

3'SS Sequence:

GGTTCCTCAGAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACCCAA

U12 Branch Point Sequence:

GTACCCAAAACC

Flanking Amino Acid:

AQLPAFTSVAGPKVQSDKEL

Intron Amino Acid Position:

874

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

60.9

0.26

1.3

58.8

45.2

Major BPS

55.3

0.13

1.2

64.7

33.6

Major PPT

57.4

0.17

1.1

37.5

Minor 5ss

22.2

-3.2

4.1

39.7

45.7

Minor BPS

48.9

-0.1

63.04

41.5

Associated Gene:

Gene:

SNAPC4

Ensembl Gene ID:

ENSAPLG00000007557

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007857

8687247 - 8701565

14319