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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8758298_8759460_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8758298 - 8759460

Intron Length:

1163

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGAAC

5'SS Class:

strong_major

3'SS Sequence:

GTGTCTGCTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAC

U12 Branch Point Sequence:

CCAGCCTGTACT

Flanking Amino Acid:

FTEAIAFHKERLAIAKEFGD

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

38.2

Major BPS

77.2

0.68

0.8

77.6

26.2

Major PPT

72.5

0.51

65.8

40.9

Minor 5ss

31.2

-2.2

3.4

41.6

45.4

Minor BPS

47.3

-0.1

1.9

61.22

Associated Gene:

Gene:

GPSM1

Ensembl Gene ID:

ENSAPLG00000007805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027644

8720421 - 8765459

45039

ENSAPLT00000008137

8720421 - 8781713

61293