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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8759585_8761141_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8759585 - 8761141

Intron Length:

1557

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TGATTTCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

TAGCACTGATTT

Flanking Amino Acid:

ETLQKASEYYERNLSLVKEL

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.1

0.71

84.6

33.2

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

83.9

0.76

0.8

81.4

Minor 5ss

42.9

-0.8

2.9

41.2

Minor BPS

45.2

-0.2

1.8

60.89

42.4

Associated Gene:

Gene:

GPSM1

Ensembl Gene ID:

ENSAPLG00000007805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027644

8720421 - 8765459

45039

ENSAPLT00000008137

8720421 - 8781713

61293