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Intron Name: Anas_platyrhynchos_platyrhynchos_18_8761285_8761539_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8761285 - 8761539

Intron Length:

255

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTGCT

5'SS Class:

strong_major

3'SS Sequence:

TTGCTCCTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTAAC

U12 Branch Point Sequence:

GGAAGTGTAACA

Flanking Amino Acid:

LDISQEQGDKVGEARALYNI

Intron Amino Acid Position:

140

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

80.7

31.6

Major BPS

56.8

0.17

1.4

61.4

43.2

Major PPT

83.9

0.76

0.8

81.3

30.7

Minor 5ss

35.4

-1.7

3.2

50.9

45.5

Minor BPS

41.8

-0.6

2.2

50.3

40.7

Associated Gene:

Gene:

GPSM1

Ensembl Gene ID:

ENSAPLG00000007805

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027644

8720421 - 8765459

45039

ENSAPLT00000008137

8720421 - 8781713

61293